[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 69 items for (author: taylor & rk)

EMDB-41784:
PRD-0038 RBD bound to Rhinolophus alcyone ACE2 (local refinement)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-41786:
PRD-0038 RBD bound to R. alcyone ACE2
Method: single particle / : Park YJ, Veesler D

EMDB-41842:
Prefusion structure of the PRD-0038 spike glycoprotein ectodomain trimer
Method: single particle / : Lee J, Park YJ, Veesler D

EMDB-41843:
PRD-0038 Spike glycoprotein NTD
Method: single particle / : Lee J, Park YJ, Veesler D

PDB-8u0t:
PRD-0038 RBD bound to Rhinolophus alcyone ACE2 (local refinement)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8u29:
Prefusion structure of the PRD-0038 spike glycoprotein ectodomain trimer
Method: single particle / : Lee J, Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-16777:
Structure of the Nucleosome Core Particle from Trypanosoma brucei
Method: single particle / : Sandoval G, Deak G, Tuijtel MW, Wilson MD

PDB-8com:
Structure of the Nucleosome Core Particle from Trypanosoma brucei
Method: single particle / : Burdett H, Deak G, Wilson MD

EMDB-26735:
Hantavirus ANDV Gn(H) protein in complex with 2 Fabs ANDV-5 and ANDV-34
Method: single particle / : Binshtein E, Crowe JE

EMDB-26736:
Hantavirus MAPV Gn(H)/Gc protein in complex with 2 Fabs SNV-24 and SNV-53
Method: single particle / : Binshtein E, Crowe JE

EMDB-27318:
CryoEM structure of Hantavirus ANDV Gn(H) protein complex with 2Fabs ANDV-5 and ANDV-34
Method: single particle / : Binshtein E, Crowe JE

EMDB-27025:
Cryo-EM structure of Human 15-PGDH in complex with small molecule SW222746
Method: single particle / : Huang W, Taylor DJ

EMDB-29005:
human 15-PGDH with NADH bound
Method: single particle / : Huang W, Taylor D

PDB-8cwl:
Cryo-EM structure of Human 15-PGDH in complex with small molecule SW222746
Method: single particle / : Huang W, Taylor DJ

PDB-8fd8:
human 15-PGDH with NADH bound
Method: single particle / : Huang W, Taylor D

EMDB-27010:
Cryo-EM Structure of Human 15-PGDH in Complex with Small Molecule SW209415
Method: single particle / : Huang W, Taylor DJ

PDB-8cvn:
Cryo-EM Structure of Human 15-PGDH in Complex with Small Molecule SW209415
Method: single particle / : Huang W, Taylor DJ

EMDB-27178:
Structure of Cas12a2 binary complex
Method: single particle / : Bravo JPK, Taylor DW

EMDB-27179:
Cas12a2 quaternary complex
Method: single particle / : Bravo JPK, Taylor DW

EMDB-27180:
Structure of Cas12a2 ternary complex
Method: single particle / : Bravo JPK, Taylor DW

PDB-8d49:
Structure of Cas12a2 binary complex
Method: single particle / : Bravo JPK, Taylor DW

PDB-8d4a:
Cas12a2 quaternary complex
Method: single particle / : Bravo JPK, Taylor DW

PDB-8d4b:
Structure of Cas12a2 ternary complex
Method: single particle / : Bravo JPK, Taylor DW

EMDB-26322:
MVV cleaved synaptic complex (CSC) intasome at 3.4 A resolution
Method: single particle / : Shan Z, Pye VE, Cherepanov P, Lyumkis D

EMDB-14453:
MVV strand transfer complex (STC) intasome in complex with LEDGF/p75 at 3.5 A resolution
Method: single particle / : Ballandras-Colas A, Nans A, Cherepanov P

EMDB-24408:
The Capsid Structure of the ChAdOx1 viral vector/chimpanzee adenovirus Y25
Method: single particle / : Baker AT, Boyd RJ, Sarkar D, Vermaas JV, Williams D, Singharoy A

PDB-7rd1:
The Capsid Structure of the ChAdOx1 viral vector/chimpanzee adenovirus Y25
Method: single particle / : Baker AT, Boyd RJ, Sarkar D, Vermaas JV, Williams D, Singharoy A

EMDB-12585:
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (closed conformation)
Method: single particle / : Rosa A, Pye VE, Nans A, Cherepanov P

EMDB-12586:
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (one RBD erect)
Method: single particle / : Rosa A, Pye VE, Nans A, Cherepanov P

EMDB-12587:
Trimeric SARS-CoV-2 spike ectodomain bound to P008_056 Fab
Method: single particle / : Rosa A, Pye VE, Nans A, Cherepanov P

PDB-7nt9:
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (closed conformation)
Method: single particle / : Rosa A, Pye VE, Nans A, Cherepanov P

PDB-7nta:
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (one RBD erect)
Method: single particle / : Rosa A, Pye VE, Nans A, Cherepanov P

PDB-7ntc:
Trimeric SARS-CoV-2 spike ectodomain bound to P008_056 Fab
Method: single particle / : Rosa A, Pye VE, Nans A, Cherepanov P

EMDB-22738:
CryoEM reconstruction of SARS-CoV-2 receptor binding domain in complex with the Fab fragment of neutralizing antibody 46
Method: single particle / : Kucharska I, Tan YZ, Benlekbir S, Rubinstein JL, Julien JP

EMDB-22739:
CryoEM reconstruction of SARS-CoV-2 Spike in complex with the Fab fragment of neutralizing antibody 80.
Method: single particle / : Kucharska I, Tan YZ, Benlekbir S, Rubinstein JL, Julien JP

EMDB-22740:
CryoEM reconstruction of SARS-CoV-2 Spike in complex with the Fab fragment of neutralizing antibody 298
Method: single particle / : Kucharska I, Tan YZ, Benlekbir S, Rubinstein JL, Julien JP

EMDB-22741:
CryoEM reconstruction of SARS-CoV-2 Spike in complex with the Fab fragment of neutralizing antibody 324
Method: single particle / : Kucharska I, Tan YZ, Benlekbir S, Rubinstein JL, Julien JP

EMDB-10305:
cryo-em structure of alpha-synuclein fibril polymorph 2B
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Arteni AA, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

EMDB-10307:
cryo-em structure of alpha-synuclein fibril polymorph 2A
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Arteni AA, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

PDB-6sst:
cryo-em structure of alpha-synuclein fibril polymorph 2B
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Arteni AA, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

PDB-6ssx:
cryo-em structure of alpha-synuclein fibril polymorph 2A
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Arteni AA, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

EMDB-4994:
cryo-em of alpha-synuclein fibril polymorph 2A
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Arteni AA, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

EMDB-4996:
cryo-em structure of alpha-synuclein fibril polymorph 2B
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Arteni AA, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

PDB-6rt0:
cryo-em structure of alpha-synuclein fibril polymorph 2A
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Arteni AA, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

PDB-6rtb:
cryo-em structure of alpha-synuclein fibril polymorph 2B
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Arteni AA, Melki R, Meier BH, Bockmann A, Bousset L, Stahlberg H

PDB-6hij:
Cryo-EM structure of the human ABCG2-MZ29-Fab complex with cholesterol and PE lipids docked
Method: single particle / : Jackson SM, Manolaridis I, Kowal J, Zechner M, Taylor NMI, Bause M, Bauer S, Bartholomaeus R, Stahlberg H, Bernhardt G, Koenig B, Buschauer A, Altmann KH, Locher KP

EMDB-0148:
Structure of alpha-synuclein fibrils
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Mona D, Ringler P, Lauer ME, Riek R, Britschgi M, Stahlberg H

PDB-6h6b:
Structure of alpha-synuclein fibrils
Method: helical / : Guerrero-Ferreira R, Taylor NMI, Mona D, Ringler P, Lauer ME, Riek R, Britschgi M, Stahlberg H

EMDB-3953:
Structure of inhibitor-bound ABCG2
Method: single particle / : Jackson SM, Manolaridis I, Kowal J, Zechner M, Altmann KH, Locher KP

EMDB-4246:
Structure of inhibitor-bound ABCG2
Method: single particle / : Jackson SM, Manolaridis I, Kowal J, Zechner M, Altmann KH, Locher KP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more